Mapped reads for uncultivated Porticoccaceae bacterium UBA8457 genome... - SRA

SRX3576107: Mapped reads for uncultivated Porticoccaceae bacterium UBA8457 genome recovered from ERX555967
1 ILLUMINA (Illumina HiSeq 2000) run: 194,598 spots, 37.2M bases, 20.6Mb downloads

Design: Reads from ERX555967 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA8457 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Porticoccaceae bacterium UBA8457 genome recovered from ERX555967

SAMN08020424 • SRS2845990 • All experiments • All runs

Organism: Porticoccaceae bacterium

Library:

Name: UBA8457_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 194,598 spots, 37.2M bases, 20.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR6486300	194,598	37.2M	20.6Mb	2018-02-23

ID:: 4961609

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Sequence Read Archive

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